LOCUS PBN62.GB 4558 BP DS-DNA CIRCULAR SYN 15-NOV-2006 DEFINITION - ACCESSION - KEYWORDS - SOURCE - COMMENT DT 20-JUN-2001 FEATURES Location/Qualifiers gene complement(3231..4091) /note="Amp" gene 909..1431 /note="FCA1" frag 7..2174 /note="1907 to 4074 of pRS314 +(pef/FCA1/pef).MV" gene complement(<7..8) /note="lacZa' [Split]" frag join(9..>908,<1432..>2174) /note="2013 to 4467 of pRS316+(pef/Kan/pef).MV [Split]" frag join(9..>908,<1432..>2174) /note="9 to 2464 of pFA6-KanMX3 (with pefA DR).MV [Split]" primer_bind 30..95 /note="BN105" primer_bind complement(2153..2174) /note="JM42 rev." promoter 560..>908 /note="P-Tef" primer_bind 13..31 /note="JM41 fwd." terminator 1432..1671 /note="T-Tef" frag 76..525 /note="24 to 473 of pefA.MV" primer_bind 76..95 /note="BN103" primer_bind complement(506..525) /note="BN104" repeat_region 76..525 /note="pefA DR" frag 1672..2121 /note="24 to 473 of pefA.MV" primer_bind 1672..1691 /note="BN103" primer_bind complement(2102..2121) /note="BN104" repeat_region 1672..2121 /note="pefA DR" frag 909..1431 /note="2913 to 3435 of pRS316+(pef/FCA1/pef).MV" frag 909..1431 /note="459 to 981 of pPH36 (FCA1-MX4)" frag 909..1431 /note="858 to 1380 of C. albicans FCA1.MV" exon <909..963 /note="exon" /note="/number=1" intron 964..1033 /note="intron" exon 1034..>1431 /note="exon" /note="/number=2" mRNA join(<909..963,<1034..>1431) /note="cytosine deaminase" CDS join(909..963,1034..1431) /note="cytosine deaminase" BASE COUNT 1186 A 1106 C 1109 G 1157 T 0 OTHER ORIGIN Sequence 4558 BP; 1186 A; 1106 C; 1109 G; 1157 T; 0 other; 1 GAACGCGGCC GCCAGCTGAA GCTTCGTACG CTGCAGGTCG ACGGATCCCC GGGTTAATTA 61 AGGCGCGCCA GATCTCATTA TTGCACTGGG TGTTCTGGGC GGGACTGCAC ACGCTGCCAA 121 TGAAGTAACT TTCCTGGGTT CAGTAAGCGC AACAACCTGT GACCTGACCA CTTCTGTCAA 181 CGGCGCCGCT CAGCCGAACC AGGTTGTTCA GCTGGGTACC GTTCAGGCTA ACCAGCCGGG 241 TAATTTTGTT GACTTCGCCA TGAAACCGGT TGACCCGAAT GCACAGGGTT GTGCAAATCT 301 GGCTCAGAAA ACGGCCACTG TTTCCTGGGC TTCTGCTGCC CTGGATGGCG AAGGCTTTGG 361 GGCAACCAGC GGTACAGCTA CTGATGCCAA AGTACTGGTT GAAAGCGTGA ACTCCAAAAA 421 CCCGGGGGCT GTAAACGCTA ACGCCAGCAC GGTTGACTTT GAAGGTGCCA AGCTGACCAC 481 CGACGGCCTG CAGTTCAAAG CCAAGCTGAA AGGTGGTGCG ACCGAGTTTA GCTTGCCTCG 541 TCCCCGCCGG GTCACCCGGC CAGCGACATG GAGGCCCAGA ATACCCTCCT TGACAGTCTT 601 GACGTGCGCA GCTCAGGGGC ATGATGTGAC TGTCGCCCGT ACATTTAGCC CATACATCCC 661 CATGTATAAT CATTTGCATC CATACATTTT GATGGCCGCA CGGCGCGAAG CAAAAATTAC 721 GGCTCCTCGC TGCAGACCTG CGAGCAGGGA AACGCTCCCC TCACAGACGC GTTGAATTGT 781 CCCCACGCCG CGCCCCTGTA GAGAAATATA AAAGGTTAGG ATTTGCCACT GAGGTTCTTC 841 TTTCATATAC TTCCTTTTAA AATCTTGCTA GGATACAGTT CTCACATCAC ATCCGAACAT 901 AAACAACCAT GACGTTTGAC GACAAAAAAG GTTTACAAGT TGCTCTTGAT CAAGCCAAGA 961 AAAGTATGTG TATATCATGC CCACTCTGAA CTTTCAATTA AAATCCAGCT TTACTAACAC 1021 ACTTGCTGTC CAGGTTACTC AGAAGGTGGG ATACCTATTG GTTCATGTAT TATTTCATCT 1081 GATGACACAG TATTAGGCCA AGGTCACAAC GAAAGAATCC AAAAACATTC AGCTATTTTA 1141 CATGGAGAAA TGTCAGCATT AGAAAACGCA GGAAGATTAC CAGGAAAAAC TTATAAAGAT 1201 TGTACCATCT ATACTACTTT ATCACCATGT AGTATGTGTA CTGGGGCCAT TTTATTATAT 1261 GGATTCAAAA GAGTTGTGAT GGGAGAAAAT GTCAATTTCT TGGGTAATGA AAAGTTATTG 1321 ATTGAAAATG GTGTCGAAGT TGTGAATTTA AATGATCAAG AATGTATTGA TTTGATGGCC 1381 AAATTCATTA AAGAGAAACC ACAAGATTGG AATGAAGATA TTGGAGAATA ATCAGTACTG 1441 ACAATAAAAA GATTCTTGTT TTCAAGAACT TGTCATTTGT ATAGTTTTTT TATATTGTAG 1501 TTGTTCTATT TTAATCAAAT GTTAGCGTGA TTTATATTTT TTTTCGCCTC GACATCATCT 1561 GCCCAGATGC GAAGTTAAGT GCGCAGAAAG TAATATCATG CGTCAATCGT ATGTGAATGC 1621 TGGTCGCTAT ACTGCTGTCG ATTCGATACT AACGCCGCCA TCCAGTGTCG ACATTATTGC 1681 ACTGGGTGTT CTGGGCGGGA CTGCACACGC TGCCAATGAA GTAACTTTCC TGGGTTCAGT 1741 AAGCGCAACA ACCTGTGACC TGACCACTTC TGTCAACGGC GCCGCTCAGC CGAACCAGGT 1801 TGTTCAGCTG GGTACCGTTC AGGCTAACCA GCCGGGTAAT TTTGTTGACT TCGCCATGAA 1861 ACCGGTTGAC CCGAATGCAC AGGGTTGTGC AAATCTGGCT CAGAAAACGG CCACTGTTTC 1921 CTGGGCTTCT GCTGCCCTGG ATGGCGAAGG CTTTGGGGCA ACCAGCGGTA CAGCTACTGA 1981 TGCCAAAGTA CTGGTTGAAA GCGTGAACTC CAAAAACCCG GGGGCTGTAA ACGCTAACGC 2041 CAGCACGGTT GACTTTGAAG GTGCCAAGCT GACCACCGAC GGCCTGCAGT TCAAAGCCAA 2101 GCTGAAAGGT GGTGCGACCG AGTTTAAACG AGCTCGAATT CATCGATGAT ATCAGATCCA 2161 CTAGTGGCCT ATGCGGCCGC GGATCTGCCG GTCTCCCTAT AGTGAGTCGT ATTAATTTCG 2221 ATAAGCCAGG TTAACCTGCA TTAATGAATC GGCCAACGCG CGGGGAGAGG CGGTTTGCGT 2281 ATTGGGCGCT CTTCCGCTTC CTCGCTCACT GACTCGCTGC GCTCGGTCGT TCGGCTGCGG 2341 CGAGCGGTAT CAGCTCACTC AAAGGCGGTA ATACGGTTAT CCACAGAATC AGGGGATAAC 2401 GCAGGAAAGA ACATGTGAGC AAAAGGCCAG CAAAAGGCCA GGAACCGTAA AAAGGCCGCG 2461 TTGCTGGCGT TTTTCCATAG GCTCCGCCCC CCTGACGAGC ATCACAAAAA TCGACGCTCA 2521 AGTCAGAGGT GGCGAAACCC GACAGGACTA TAAAGATACC AGGCGTTTCC CCCTGGAAGC 2581 TCCCTCGTGC GCTCTCCTGT TCCGACCCTG CCGCTTACCG GATACCTGTC CGCCTTTCTC 2641 CCTTCGGGAA GCGTGGCGCT TTCTCAATGC TCACGCTGTA GGTATCTCAG TTCGGTGTAG 2701 GTCGTTCGCT CCAAGCTGGG CTGTGTGCAC GAACCCCCCG TTCAGCCCGA CCGCTGCGCC 2761 TTATCCGGTA ACTATCGTCT TGAGTCCAAC CCGGTAAGAC ACGACTTATC GCCACTGGCA 2821 GCAGCCACTG GTAACAGGAT TAGCAGAGCG AGGTATGTAG GCGGTGCTAC AGAGTTCTTG 2881 AAGTGGTGGC CTAACTACGG CTACACTAGA AGGACAGTAT TTGGTATCTG CGCTCTGCTG 2941 AAGCCAGTTA CCTTCGGAAA AAGAGTTGGT AGCTCTTGAT CCGGCAAACA AACCACCGCT 3001 GGTAGCGGTG GTTTTTTTGT TTGCAAGCAG CAGATTACGC GCAGAAAAAA AGGATCTCAA 3061 GAAGATCCTT TGATCTTTTC TACGGGGTCT GACGCTCAGT GGAACGAAAA CTCACGTTAA 3121 GGGATTTTGG TCATGAGATT ATCAAAAAGG ATCTTCACCT AGATCCTTTT AAATTAAAAA 3181 TGAAGTTTTA AATCAATCTA AAGTATATAT GAGTAAACTT GGTCTGACAG TTACCAATGC 3241 TTAATCAGTG AGGCACCTAT CTCAGCGATC TGTCTATTTC GTTCATCCAT AGTTGCCTGA 3301 CTCCCCGTCG TGTAGATAAC TACGATACGG GAGGGCTTAC CATCTGGCCC CAGTGCTGCA 3361 ATGATACCGC GAGACCCACG CTCACCGGCT CCAGATTTAT CAGCAATAAA CCAGCCAGCC 3421 GGAAGGGCCG AGCGCAGAAG TGGTCCTGCA ACTTTATCCG CCTCCATCCA GTCTATTAAT 3481 TGTTGCCGGG AAGCTAGAGT AAGTAGTTCG CCAGTTAATA GTTTGCGCAA CGTTGTTGCC 3541 ATTGCTACAG GCATCGTGGT GTCACGCTCG TCGTTTGGTA TGGCTTCATT CAGCTCCGGT 3601 TCCCAACGAT CAAGGCGAGT TACATGATCC CCCATGTTGT GCAAAAAAGC GGTTAGCTCC 3661 TTCGGTCCTC CGATCGTTGT CAGAAGTAAG TTGGCCGCAG TGTTATCACT CATGGTTATG 3721 GCAGCACTGC ATAATTCTCT TACTGTCATG CCATCCGTAA GATGCTTTTC TGTGACTGGT 3781 GAGTACTCAA CCAAGTCATT CTGAGAATAG TGTATGCGGC GACCGAGTTG CTCTTGCCCG 3841 GCGTCAATAC GGGATAATAC CGCGCCACAT AGCAGAACTT TAAAAGTGCT CATCATTGGA 3901 AAACGTTCTT CGGGGCGAAA ACTCTCAAGG ATCTTACCGC TGTTGAGATC CAGTTCGATG 3961 TAACCCACTC GTGCACCCAA CTGATCTTCA GCATCTTTTA CTTTCACCAG CGTTTCTGGG 4021 TGAGCAAAAA CAGGAAGGCA AAATGCCGCA AAAAAGGGAA TAAGGGCGAC ACGGAAATGT 4081 TGAATACTCA TACTCTTCCT TTTTCAATAT TATTGAAGCA TTTATCAGGG TTATTGTCTC 4141 ATGAGCGGAT ACATATTTGA ATGTATTTAG AAAAATAAAC AAATAGGGGT TCCGCGCACA 4201 TTTCCCCGAA AAGTGCCACC TGACGTCTAA GAAACCATTA TTATCATGAC ATTAACCTAT 4261 AAAAATAGGC GTATCACGAG GCCCTTTCGT CTCGCGCGTT TCGGTGATGA CGGTGAAAAC 4321 CTCTGACACA TGCAGCTCCC GGAGACGGTC ACAGCTTGTC TGTAAGCGGA TGCCGGGAGC 4381 AGACAAGCCC GTCAGGGCGC GTCAGCGGGT GTTGGCGGGT GTCGGGGCTG GCTTAACTAT 4441 GCGGCATCAG AGCAGATTGT ACTGAGAGTG CACCATATGG ACATATTGTC GTTAGAACGC 4501 GGCTACAATT AATACATAAC CTTATGTATC ATACACATAC GATTTAGGTG ACACTATA //